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GEDLIB
1.0
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| ▼ data | |
| ► collections | |
| analyze_dataset.py | Python script that computes statistics of a given dataset |
| GraphCollection.dtd | |
| graphs_of_given_size.py | Python script that generates a collection of graphs with given number of nodes from directory containing GXL files |
| sample.py | Python script that generates a random sample of given size from a given dataset |
| ► datasets | |
| ► S-MOL | |
| generate_molecules.py | Python script for generating synthetic molecules |
| ▼ src | |
| ► edit_costs | |
| chem_1.hpp | Ged::CHEM1 class declaration |
| chem_1.ipp | Ged::CHEM1 class definition |
| chem_2.hpp | Ged::CHEM2 class declaration |
| chem_2.ipp | Ged::CHEM2 class definition |
| cmu.hpp | Ged::CMU class declaration |
| cmu.ipp | Ged::CMU class definition |
| constant.hpp | Ged::Constant class declaration |
| constant.ipp | Ged::Constant class definition |
| edit_costs.hpp | Ged::EditCosts class declaration |
| edit_costs.ipp | Ged::EditCosts class definition |
| fingerprint.hpp | Ged::Fingerprint class declaration |
| fingerprint.ipp | Ged::Fingerprint class definition |
| grec_1.hpp | Ged::GREC1 class declaration |
| grec_1.ipp | |
| grec_2.hpp | Ged::GREC2 class declaration |
| grec_2.ipp | Ged::GREC2 class definition |
| letter.hpp | Ged::Letter class declaration |
| letter.ipp | Ged::Letter class definition |
| protein.hpp | Ged::Protein class declaration |
| protein.ipp | Ged::Protein class definition |
| ► env | |
| common_types.hpp | Type declarations used by various classes |
| error.hpp | Ged::Error class declaration |
| error.ipp | Ged::Error class definition |
| ged_data.hpp | Ged::GEDData class declaration |
| ged_data.ipp | Ged::GEDData class definition |
| ged_env.gxl.cpp | Ged::GEDEnv<ged::GXLUserNodeID, ged::GXLLabel, ged::GXLLabel> template instantiation |
| ged_env.hpp | Ged::GEDEnv class declaration |
| ged_env.ipp | Ged::GEDEnv class definition |
| ged_graph.hpp | Ged::GEDGraph class declaration |
| ged_graph.ipp | GEDGraph class definition |
| matrix.hpp | Ged::Matrix class declaration |
| matrix.ipp | Ged::Matrix class definition |
| node_map.hpp | Ged::NodeMap class declaration |
| node_map.ipp | Ged::NodeMap class definition |
| progress_bar.hpp | Ged::ProgressBar class declaration |
| progress_bar.ipp | Ged::ProgressBar class definition |
| result.hpp | Ged::Result struct declaration |
| result.ipp | Ged::Result struct definition |
| timer.hpp | Ged::Timer class declaration |
| timer.ipp | Ged::Timer class definition |
| ► methods | |
| all_methods.hpp | Includes all methods to enable mutual usability while avoiding circular dependencies |
| anchor_aware_ged.hpp | Ged::AnchorAwareGED class declaration |
| anchor_aware_ged.ipp | Ged::AnchorAwareGED class definition |
| bipartite.hpp | Ged::Bipartite class declaration |
| bipartite.ipp | Bipartite class definition |
| bipartite_ml.hpp | Ged::BipartiteML class declaration |
| bipartite_ml.ipp | Ged::BipartiteML class definition |
| blp_no_edge_labels.hpp | Ged::BLPNoEdgeLabels class declaration |
| blp_no_edge_labels.ipp | Ged::BLPNoEdgeLabels class definition |
| bp_beam.hpp | Ged::BPBeam class declaration |
| bp_beam.ipp | Ged::BPBeam class definition |
| branch.hpp | Ged::Branch class declaration |
| branch.ipp | Branch class definition |
| branch_compact.hpp | Ged::BranchCompact class declaration |
| branch_compact.ipp | BranchCompact class definition |
| branch_fast.hpp | Ged::BranchFast class declaration |
| branch_fast.ipp | BranchFast class definition |
| branch_tight.hpp | Ged::BranchTight class declaration |
| branch_tight.ipp | Ged::BranchTight class definition |
| branch_uniform.hpp | Ged::BranchUniform class declaration |
| branch_uniform.ipp | BranchUniform class definition |
| compact_mip.hpp | Ged::CompactMIP class declaration |
| compact_mip.ipp | Ged::CompactMIP class definition |
| f1.hpp | Ged::F1 class declaration |
| f1.ipp | Ged::F1 class definition |
| f2.hpp | Ged::F2 class declaration |
| f2.ipp | Ged::F2 class definition |
| ged_method.hpp | Ged::GEDMethod class declaration |
| ged_method.ipp | GEDMethod class definition |
| hed.hpp | Ged::HED class declaration |
| hed.ipp | Ged::HED class definition |
| hybrid.hpp | Ged::Hybrid class declaration |
| hybrid.ipp | Hybrid class definition |
| ipfp.hpp | Ged::IPFP class declaration |
| ipfp.ipp | Ged::IPFP class definition |
| ls_based_method.hpp | Ged::LSBasedMethod class declaration |
| ls_based_method.ipp | Ged::LSBasedMethod class definition |
| lsape_based_method.hpp | Ged::LSAPEBasedMethod class declaration |
| lsape_based_method.ipp | Ged::LSAPEBasedMethod class defeinition |
| mip_based_method.hpp | Ged::MIPBasedMethod class declaration |
| mip_based_method.ipp | Ged::MIPBasedMethod class definition |
| ml_based_method.hpp | Ged::MLBasedMethod class declaration |
| ml_based_method.ipp | Ged::MLBasedMethod class definition |
| node.hpp | Ged::Node class declaration |
| node.ipp | Node class definition |
| partition.hpp | Partition class declaration |
| partition.ipp | Partition class definition |
| refine.hpp | Ged::Refine class declaration |
| refine.ipp | Ged::Refine class definition |
| ring.hpp | Ged::Ring class declaration |
| ring.ipp | Ged::Ring class definition |
| ring_ml.hpp | Ged::RingML class declaration |
| ring_ml.ipp | RingML class definition |
| simulated_annealing.hpp | Ged::SimulatedAnnealing class declaration |
| simulated_annealing.ipp | Ged::SimulatedAnnealing class definition |
| star.hpp | Ged::Star class declaration |
| star.ipp | Ged::Star class definition |
| subgraph.hpp | Ged::Subgraph class declaration |
| subgraph.ipp | Ged::Subgraph class definition |
| walks.hpp | Ged::Walks class declaration |
| walks.ipp | Ged::Walks class definition |
| ► util | |
| lsap_solver.hpp | Ged::LSAPSolver class declaration |
| lsap_solver.ipp | Ged::LSAPSolver class definition |
| lsape_solver.hpp | Ged::LSAPESolver class declaration |
| lsape_solver.ipp | Ged::LSAPESolver class definition |
| misc.hpp | Declaration of miscellaneous utility functions |
| misc.ipp | Definition of miscellaneous utility functions |
| ▼ tests | |
| ► sspr2018 | |
| ► src | |
| learn_ring_params.cpp | Learn the parameters of the method ged::Ring for different datasets |
| learn_subgraph_depths.cpp | Learn the parameters of the method ged::Subgraph for different datasets |
| learn_walks_depths.cpp | Learn the parameters of the method ged::Walks for different datasets |
| test_lsape_based_methods.cpp | Tests performance of derived classes of ged::LSAPEBasedMethod |
| ► tkde2019 | |
| ► src | |
| tests.cpp | Carries out the tests for PR submission |
| train_ml.cpp | Trains the methods ged::RingML and ged::BipartiteML for different datasets |
| train_ring.cpp | Trains the method ged::Ring for different datasets |
| train_subgraph.cpp | Trains the method ged::Subgraph for different datasets |
| train_walks.cpp | Trains the method ged::Walks for different datasets |
| util.hpp | Provides utility functions for tests of PR submission |
| ► vldbj2019 | |
| ► src | |
| test_best_methods.cpp | Runs tests for VLDB J. submission |
| test_lp_based_methods.cpp | Runs tests for VLDB J. submission |
| test_ls_based_methods.cpp | Runs tests for VLDB J. submission |
| test_lsape_based_methods.cpp | Runs tests for VLDB J. submission |
| test_misc_methods.cpp | Runs tests for VLDB J. submission |
| train_ml.cpp | Trains the methods ged::RingML and ged::BipartiteML for different datasets |
| train_ring.cpp | Trains the method ged::Ring for different datasets |
| train_subgraph.cpp | Trains the method ged::Subgraph for different datasets |
| train_walks.cpp | Trains the method ged::Walks for different datasets |
| util.hpp | Provides utility functions for tests of VLDB J. submission |
| process_results.py | Processes results of experiments for VLDB Journal paper |
| install.py | Installs GEDLIB and its dependencies |
1.8.13